prometry.pdbobject.PdbAtom

class documentation

class PdbAtom:

Class for a single atom

:data atom_type: :data atom_name: :data x: :data y: :data z: :data disordered: :data occupancy: :data bfactor:

Method	`__init__`	Initialises a pdb with a biopython structure
Method	`__str__`	Undocumented
Method	`infoAtom`	Undocumented
Method	`matchesCriteria`	Undocumented
Instance Variable	`atom_name`	Undocumented
Instance Variable	`atom_no`	Undocumented
Instance Variable	`atom_type`	Undocumented
Instance Variable	`bfactor`	Undocumented
Instance Variable	`chain`	Undocumented
Instance Variable	`disordered`	Undocumented
Instance Variable	`info`	Undocumented
Instance Variable	`occupancy`	Undocumented
Instance Variable	`res`	Undocumented
Instance Variable	`x`	Undocumented
Instance Variable	`y`	Undocumented
Instance Variable	`z`	Undocumented

def __init__(self, chain, res, atom_type, atom_name, atom_no, disordered, occupancy, bfactor, x, y, z): ¶

Initialises a pdb with a biopython structure

:param biopython_structure: A list of structures that has been created from biopython

def __str__(self): ¶

Undocumented

def infoAtom(self): ¶

Undocumented

def matchesCriteria(self, criteria, rids=[], dis=-1): ¶

Undocumented

atom_name = ¶

Undocumented

atom_no = ¶

Undocumented

atom_type = ¶

Undocumented

bfactor = ¶

Undocumented

chain = ¶

Undocumented

disordered = ¶

Undocumented

info: dict = ¶

Undocumented

occupancy = ¶

Undocumented

Undocumented

Undocumented

Undocumented

Undocumented